Hotels in Kilifi

Based on the ratings from momondo users, the top-rated hotel in Kilifi is Sultan Palace, located in Mtwapa and with an average rating of 10.0. The second highest-rated hotel in Kilifi is Hotel Villa Malindi, which is found in Malindi and was given an average score of 9.7 by our users. The third best hotel rating is a 9.6, which was given to Travellers Inn Resort Malindi in Malindi.

In June, you can expect the cost of a double room in a hotel in Kilifi to be around $98 per night. However, some users found double rooms in Kilifi during the month of June for as low as $11 per night in Malindi.

At just $13 per night, Malindi has hotel room rates that are 94% less than other cities in Kilifi.

If you’re planning to stay somewhere in Kilifi with your family, then consider booking rooms at Flamingo Villas Resort, which is a popular choice among our users with families. Per night prices average $63 for a room at Flamingo Villas Resort. Kilili Baharini Resort & Spa ($138 per night) and Lily Palm Resort ($81 per night) are other popular family hotel options in Kilifi.

As of June 2025, there are 1,615 operators available to choose from for hotels in Kilifi.

Prices for hotels in Kilifi are updated daily.

Those looking for a hotel near Watamu Beach should expect to pay $291/night for area hotels. Below are the 11 best hotel options in the area. Hotels near Watamu Beach are typically 55% more expensive than the average hotel in Kilifi, which is $128.